Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isncy family transposase | E0F20_25750 | Not Available | Negative | 5165967 - 5167307 | 51706.0 |
| hypothetical protein | E0F20_25755 | Not Available | Positive | 5167456 - 5167743 | 11186.0 |
| single-stranded dna-binding protein | E0F20_25760 | Not Available | Negative | 5167740 - 5168309 | 20626.2 |
| hnh endonuclease | E0F20_25765 | Not Available | Positive | 5168863 - 5170476 | 60552.4 |
| hypothetical protein | E0F20_25770 | Not Available | Negative | 5170592 - 5170891 | 12002.3 |
| integrase | E0F20_25775 | Not Available | Negative | 5171237 - 5171357 | 4426.15 |
| duf4158 domain-containing protein | E0F20_25785 | Not Available | Positive | 5173146 - 5173829 | 25960.5 |
| is1 family transposase | E0F20_25790 | Not Available | Positive | 5173858 - 5173929 | 2357.77 |
| hypothetical protein | E0F20_25800 | Not Available | Negative | 5176575 - 5176942 | 14598.3 |
| duf3644 domain-containing protein | E0F20_25805 | Not Available | Negative | 5176996 - 5178237 | 47898.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

