Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction alleviation protein, lar family | E0F20_25515 | Not Available | Positive | 5128713 - 5128910 | 7197.35 |
| hypothetical protein | E0F20_25520 | Not Available | Positive | 5128963 - 5129421 | 17016.6 |
| hypothetical protein | E0F20_25525 | Not Available | Positive | 5129725 - 5130357 | 23890.8 |
| hypothetical protein | E0F20_25535 | Not Available | Negative | 5131152 - 5131424 | 9855.59 |
| cyclic diguanylate phosphodiesterase | E0F20_25540 | Not Available | Positive | 5131664 - 5133187 | 56433.8 |
| hypothetical protein | E0F20_25545 | Not Available | Positive | 5133357 - 5133554 | 7221.97 |
| 3-deoxy-d-manno-oct-2-ulosonate iii transferase waaz | E0F20_25550 | Not Available | Negative | 5133586 - 5134362 | 28831.7 |
| hypothetical protein | E0F20_25555 | Not Available | Negative | 5134379 - 5136624 | 86351.2 |
| duf2767 family protein | E0F20_25560 | Not Available | Negative | 5136944 - 5137159 | 8096.65 |
| hypothetical protein | E0F20_25570 | Not Available | Positive | 5137764 - 5138509 | 28641.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

