Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | E0F20_25460 | Not Available | Negative | 5120030 - 5120106 | 2866.62 |
| hypothetical protein | E0F20_25465 | Not Available | Positive | 5120208 - 5120411 | 6995.54 |
| is4-like element is421 family transposase | E0F20_25470 | Not Available | Positive | 5120492 - 5121604 | 40911.1 |
| is3 family transposase | E0F20_25480 | Not Available | Negative | 5123605 - 5123777 | 6502.71 |
| 6-carboxytetrahydropterin synthase qued | E0F20_25485 | Not Available | Positive | 5123915 - 5124277 | 13672.5 |
| 7-carboxy-7-deazaguanine synthase quee | E0F20_25490 | Not Available | Negative | 5124369 - 5125040 | 25053.0 |
| n-acetylmannosamine-6-phosphate 2-epimerase | E0F20_25495 | Not Available | Negative | 5125112 - 5125801 | 24242.5 |
| pts glucose transporter subunit iib | E0F20_25500 | Not Available | Negative | 5125801 - 5127357 | 55759.8 |
| hypothetical protein | E0F20_25505 | Not Available | Positive | 5127673 - 5127864 | 6810.22 |
| hypothetical protein | E0F20_25510 | Not Available | Positive | 5127995 - 5128690 | 25400.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

