Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | E0F20_25405 | Not Available | Negative | 5109657 - 5110415 | 27030.4 |
| lysr family transcriptional regulator | E0F20_25410 | Not Available | Positive | 5110535 - 5111434 | 33388.5 |
| inner membrane protein yhjd | E0F20_25415 | Not Available | Positive | 5111482 - 5112507 | 38408.4 |
| hypothetical protein | E0F20_25420 | Not Available | Negative | 5112673 - 5113026 | 13502.5 |
| hypothetical protein | E0F20_25425 | Not Available | Negative | 5113010 - 5113378 | 14042.6 |
| duf1311 domain-containing protein | E0F20_25430 | Not Available | Negative | 5113368 - 5113940 | 21311.8 |
| resolvase | E0F20_25440 | Not Available | Negative | 5114391 - 5116307 | 72913.8 |
| duf3950 domain-containing protein | E0F20_25445 | Not Available | Negative | 5116409 - 5116576 | 6589.98 |
| type i addiction module toxin, syme family | E0F20_25450 | Not Available | Positive | 5116705 - 5116995 | 10728.7 |
| intestinal colonization autotransporter adhesin misl | E0F20_25455 | Not Available | Negative | 5117130 - 5119955 | 99821.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

