Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | E0F20_25350 | Not Available | Positive | 5098108 - 5098437 | 12493.4 |
| xre family transcriptional regulator | E0F20_25355 | Not Available | Positive | 5098418 - 5098699 | 10972.2 |
| is5-like element iskpn26 family transposase | E0F20_25360 | Not Available | Positive | 5098977 - 5099957 | 37744.6 |
| non-heme ferritin-like protein | E0F20_25365 | Not Available | Negative | 5100274 - 5100774 | 19032.6 |
| dde domain-containing protein | E0F20_25370 | Not Available | Negative | 5101101 - 5101382 | 10552.0 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | E0F20_25375 | Not Available | Positive | 5101457 - 5102962 | 54075.0 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | E0F20_25380 | Not Available | Positive | 5102974 - 5104899 | 70524.0 |
| hypothetical protein | E0F20_25385 | Not Available | Positive | 5105550 - 5106719 | 42746.3 |
| hnh endonuclease | E0F20_25390 | Not Available | Positive | 5106893 - 5108401 | 56722.7 |
| helix-turn-helix domain-containing protein | E0F20_25400 | Not Available | Negative | 5108931 - 5109134 | 8122.95 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

