Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 4992061 - 4992136 | Not Available |
| multidrug efflux smr transporter | E0F20_24755 | Not Available | Positive | 4992656 - 4993006 | 12880.4 |
| multidrug efflux smr transporter | E0F20_24760 | Not Available | Positive | 4993003 - 4993332 | 12068.4 |
| choline trimethylamine-lyase | E0F20_24765 | Not Available | Positive | 4993346 - 4995724 | 89435.9 |
| glycyl-radical enzyme activating protein | E0F20_24770 | Not Available | Positive | 4995687 - 4996661 | 35443.7 |
| is1 family transposase | E0F20_24775 | Not Available | Positive | 4996842 - 4997040 | 7108.49 |
| parm/stba family protein | E0F20_24780 | Not Available | Positive | 4997601 - 4998623 | 37374.7 |
| hypothetical protein | E0F20_24785 | Not Available | Positive | 4998638 - 4999168 | 19238.6 |
| lytic transglycosylase domain-containing protein | E0F20_24790 | Not Available | Positive | 4999198 - 4999758 | 20736.7 |
| hypothetical protein | E0F20_24795 | Not Available | Positive | 4999751 - 5000281 | 20388.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

