Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | E0F20_24695 | Not Available | Negative | 4982753 - 4983271 | 18984.2 |
| lon protease family protein | E0F20_24700 | Not Available | Negative | 4983340 - 4985100 | 65988.6 |
| macrodomain ter protein matp | E0F20_24705 | Not Available | Positive | 4985286 - 4985738 | 17803.6 |
| porin ompa | E0F20_24710 | Not Available | Negative | 4985827 - 4986885 | 37890.5 |
| is30 family transposase | E0F20_24715 | Not Available | Positive | 4987251 - 4987368 | 4430.17 |
| Trna-asn | Not Available | Not Available | Positive | 4987726 - 4987801 | Not Available |
| nitrogen assimilation transcriptional regulator | E0F20_24730 | Not Available | Positive | 4988128 - 4989045 | 32809.9 |
| hth-type transcriptional regulator cbl | E0F20_24735 | Not Available | Positive | 4989147 - 4990097 | 35604.9 |
| Trna-asn | Not Available | Not Available | Positive | 4990238 - 4990313 | Not Available |
| emmdr/yeeo family multidrug/toxin efflux mate transporter | E0F20_24745 | Not Available | Negative | 4990413 - 4991900 | 53946.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

