Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux transporter emrab transcriptional repressor emrr | E0F20_24635 | Not Available | Positive | 4972413 - 4972943 | 20527.6 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | E0F20_24640 | Not Available | Positive | 4973074 - 4974246 | 42586.0 |
| multidrug efflux mfs transporter permease subunit emrb | E0F20_24645 | Not Available | Positive | 4974263 - 4975801 | 55845.9 |
| porin | E0F20_24650 | Not Available | Negative | 4975850 - 4977217 | 51398.4 |
| amino acid abc transporter substrate-binding protein | E0F20_24655 | Not Available | Positive | 4977695 - 4978720 | 36965.8 |
| amino acid abc transporter permease | E0F20_24660 | Not Available | Positive | 4978790 - 4979971 | 43463.1 |
| amino acid abc transporter permease | E0F20_24665 | Not Available | Positive | 4979981 - 4981084 | 41470.6 |
| amino acid abc transporter atp-binding protein | E0F20_24670 | Not Available | Positive | 4981092 - 4981850 | 28629.1 |
| Trna-thr | Not Available | Not Available | Positive | 4982093 - 4982168 | Not Available |
| ribosome modulation factor | E0F20_24690 | Not Available | Positive | 4982478 - 4982645 | 6542.93 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

