Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator sdia | E0F20_24425 | Not Available | Positive | 4936655 - 4937377 | 27892.5 |
| duf2594 family protein | E0F20_24430 | Not Available | Negative | 4937444 - 4937668 | 8205.95 |
| two-component system response regulator uvry | E0F20_24435 | Not Available | Positive | 4938128 - 4938784 | 23955.2 |
| excinuclease abc subunit uvrc | E0F20_24440 | Not Available | Positive | 4938781 - 4940613 | 68152.2 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | E0F20_24445 | Not Available | Positive | 4940669 - 4941217 | 20801.8 |
| Trna-gly | Not Available | Not Available | Positive | 4941369 - 4941444 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 4941496 - 4941569 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4941582 - 4941668 | Not Available |
| duf1471 domain-containing protein | E0F20_24465 | Not Available | Positive | 4942008 - 4942283 | 9972.71 |
| l-ribulose-5-phosphate 4-epimerase | E0F20_24470 | Not Available | Negative | 4942416 - 4943102 | 25422.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

