Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diol dehydratase reactivase subunit alpha | E0F20_24375 | Not Available | Negative | 4926539 - 4928350 | 63125.8 |
| diol dehydratase small subunit | E0F20_24380 | Not Available | Negative | 4928361 - 4928789 | 16133.2 |
| propanediol/glycerol family dehydratase medium subunit | E0F20_24385 | Not Available | Negative | 4928792 - 4929376 | 21304.8 |
| propanediol/glycerol family dehydratase large subunit | E0F20_24390 | Not Available | Negative | 4929388 - 4931055 | 60496.1 |
| mfs transporter | E0F20_24395 | Not Available | Positive | 4931175 - 4932424 | 45195.5 |
| envelope stress sensor histidine kinase cpxa | E0F20_24400 | Not Available | Negative | 4932468 - 4933841 | 51606.3 |
| envelope stress response regulator transcription factor cpxr | E0F20_24405 | Not Available | Negative | 4933838 - 4934536 | 26341.8 |
| cell-envelope stress modulator cpxp | E0F20_24410 | Not Available | Positive | 4934687 - 4935187 | 18918.4 |
| hypothetical protein | E0F20_24415 | Not Available | Negative | 4935394 - 4935753 | 13343.1 |
| type iv secretion protein rhs | E0F20_24420 | Not Available | Negative | 4935750 - 4936313 | 22319.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

