Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | E0F20_23890 | Not Available | Negative | 4828576 - 4829418 | 32029.4 |
| oligopeptidase a | E0F20_23895 | Not Available | Positive | 4829627 - 4831669 | 77106.2 |
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | E0F20_23900 | Not Available | Positive | 4831678 - 4832427 | 26827.6 |
| nad(p)/fad-dependent oxidoreductase | E0F20_23905 | Not Available | Negative | 4832533 - 4833732 | 43290.5 |
| mfs transporter tsga | E0F20_23910 | Not Available | Positive | 4833932 - 4835113 | 43273.2 |
| nitrite reductase large subunit | E0F20_23915 | Not Available | Positive | 4835420 - 4837963 | 93250.8 |
| nitrite reductase small subunit nird | E0F20_23920 | Not Available | Positive | 4837960 - 4838286 | 12226.6 |
| hypothetical protein | E0F20_23925 | Not Available | Negative | 4838194 - 4838484 | 10828.4 |
| nitrite transporter nirc | E0F20_23930 | Not Available | Positive | 4838485 - 4839294 | 28637.2 |
| uroporphyrinogen-iii c-methyltransferase | E0F20_23935 | Not Available | Positive | 4839310 - 4840683 | 50080.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

