Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-3-deoxygluconate transporter | E0F20_23585 | Not Available | Negative | 4771732 - 4772715 | 33745.4 |
| superoxide dismutase | E0F20_23590 | Not Available | Negative | 4772949 - 4773569 | 22958.0 |
| l-rhamnose/proton symporter rhat | E0F20_23595 | Not Available | Positive | 4773858 - 4774892 | 37136.9 |
| type vi secretion system tube protein hcp | E0F20_23600 | Not Available | Negative | 4774982 - 4775461 | 17923.5 |
| dna-binding protein | E0F20_23605 | Not Available | Negative | 4776118 - 4776519 | 15212.6 |
| hypothetical protein | E0F20_23610 | Not Available | Positive | 4777068 - 4777559 | 17896.7 |
| gnat family n-acetyltransferase | E0F20_23615 | Not Available | Negative | 4777645 - 4778136 | 17993.6 |
| transcriptional regulator | E0F20_23620 | Not Available | Negative | 4778307 - 4778564 | 9553.62 |
| hypothetical protein | E0F20_23625 | Not Available | Negative | 4778853 - 4779233 | 14178.5 |
| dna replication protein | E0F20_23630 | Not Available | Negative | 4779546 - 4780436 | 33609.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

