Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinolinate synthase nada | E0F20_23535 | Not Available | Positive | 4762919 - 4763962 | 37728.4 |
| nicotinamide riboside transporter pnuc | E0F20_23540 | Not Available | Positive | 4763990 - 4764709 | 26899.6 |
| cdf family zinc transporter zitb | E0F20_23545 | Not Available | Negative | 4764706 - 4765647 | 34608.6 |
| hypothetical protein | E0F20_23550 | Not Available | Negative | 4765761 - 4766135 | 12906.8 |
| 3-deoxy-7-phosphoheptulonate synthase arog | E0F20_23555 | Not Available | Positive | 4766453 - 4767505 | 37827.4 |
| hypothetical protein | E0F20_23560 | Not Available | Positive | 4767652 - 4768078 | 15882.0 |
| hypothetical protein | E0F20_23565 | Not Available | Negative | 4768079 - 4769025 | 35973.8 |
| gntr family transcriptional regulator | E0F20_23570 | Not Available | Negative | 4769034 - 4769738 | 27149.3 |
| 6-n-hydroxylaminopurine resistance protein | E0F20_23575 | Not Available | Negative | 4769967 - 4770641 | 25043.8 |
| dihydrodipicolinate synthase family protein | E0F20_23580 | Not Available | Positive | 4770794 - 4771690 | 32875.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

