Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyd operon protein ybge | E0F20_23435 | Not Available | Negative | 4749320 - 4749613 | 10990.9 |
| cytochrome bd-i oxidase subunit cydx | E0F20_23440 | Not Available | Negative | 4749613 - 4749726 | 4013.84 |
| cytochrome d ubiquinol oxidase subunit ii | E0F20_23445 | Not Available | Negative | 4749741 - 4750880 | 42286.4 |
| cytochrome bd-i ubiquinol oxidase subunit cyda | E0F20_23450 | Not Available | Negative | 4750896 - 4752464 | 58385.6 |
| hypothetical protein | E0F20_23455 | Not Available | Positive | 4752818 - 4753723 | 33395.3 |
| prd domain-containing protein | E0F20_23460 | Not Available | Positive | 4753739 - 4754101 | 13549.5 |
| yhfx family plp-dependent enzyme | E0F20_23465 | Not Available | Positive | 4754185 - 4755348 | 42572.1 |
| phosphopentomutase | E0F20_23470 | Not Available | Positive | 4755348 - 4756574 | 44046.7 |
| phosphotriesterase-related protein | E0F20_23475 | Not Available | Positive | 4756571 - 4757449 | 32840.4 |
| duf2620 domain-containing protein | E0F20_23480 | Not Available | Positive | 4757460 - 4757813 | 12391.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

