Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | E0F20_23160 | Not Available | Positive | 4698032 - 4701205 | 113827.0 |
| efflux transporter outer membrane subunit | E0F20_23165 | Not Available | Positive | 4701223 - 4702692 | 52884.8 |
| copper chaperone | E0F20_23170 | Not Available | Positive | 4703038 - 4703229 | 6908.31 |
| type iv conjugative transfer system protein trav | E0F20_23175 | Not Available | Negative | 4703722 - 4704279 | 19358.0 |
| hypothetical protein | E0F20_23180 | Not Available | Negative | 4704361 - 4704861 | 19707.7 |
| conjugal transfer protein trab | E0F20_23185 | Not Available | Negative | 4704870 - 4706279 | 49036.6 |
| type-f conjugative transfer system secretin trak | E0F20_23190 | Not Available | Negative | 4706276 - 4707016 | 26841.8 |
| conjugal transfer protein trae | E0F20_23195 | Not Available | Negative | 4707028 - 4707612 | 21610.1 |
| type iv conjugative transfer system protein tral | E0F20_23200 | Not Available | Negative | 4707618 - 4707920 | 11765.3 |
| conjugal transfer protein traa | E0F20_23205 | Not Available | Negative | 4707923 - 4708276 | 12699.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

