Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid racemase | E0F20_23100 | Not Available | Positive | 4685774 - 4686493 | 26205.9 |
| helix-turn-helix domain-containing protein | E0F20_23105 | Not Available | Negative | 4686752 - 4687174 | 16280.4 |
| heavy metal translocating p-type atpase | E0F20_23110 | Not Available | Negative | 4687249 - 4689774 | 89786.3 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | E0F20_23115 | Not Available | Positive | 4689856 - 4690308 | 17086.5 |
| cu(i)-responsive transcriptional regulator | E0F20_23120 | Not Available | Negative | 4690398 - 4690862 | 17526.0 |
| copper-translocating p-type atpase | E0F20_23125 | Not Available | Negative | 4690876 - 4693371 | 87866.6 |
| cation diffusion facilitator family transporter | E0F20_23130 | Not Available | Positive | 4693557 - 4694567 | 37064.9 |
| arsr family transcriptional regulator | E0F20_23135 | Not Available | Positive | 4694613 - 4694975 | 13497.2 |
| hypothetical protein | E0F20_23150 | Not Available | Positive | 4696158 - 4696295 | 4921.02 |
| efflux rnd transporter periplasmic adaptor subunit | E0F20_23155 | Not Available | Positive | 4696818 - 4698032 | 42140.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

