Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | E0F20_23045 | Not Available | Negative | 4673221 - 4676037 | 104142.0 |
| bifunctional riboflavin kinase/fad synthetase | E0F20_23050 | Not Available | Negative | 4676075 - 4677013 | 34541.1 |
| 30s ribosomal protein s20 | E0F20_23060 | Not Available | Positive | 4677342 - 4677605 | 9685.97 |
| yeih family protein | E0F20_23065 | Not Available | Positive | 4677889 - 4678938 | 36858.4 |
| deoxyribonuclease iv | E0F20_23070 | Not Available | Positive | 4679004 - 4679861 | 31563.3 |
| sugar kinase | E0F20_23075 | Not Available | Positive | 4679864 - 4680952 | 39985.9 |
| nupc/nupg family nucleoside cnt transporter | E0F20_23080 | Not Available | Negative | 4680999 - 4682249 | 43508.6 |
| pseudouridine-5'-phosphate glycosidase | E0F20_23085 | Not Available | Negative | 4682346 - 4683281 | 33017.0 |
| pseudouridine kinase | E0F20_23090 | Not Available | Negative | 4683269 - 4684210 | 33651.1 |
| hypochlorite stress dna-binding transcriptional regulator hypt | E0F20_23095 | Not Available | Negative | 4684513 - 4685424 | 34498.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

