Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | E0F20_22840 | Not Available | Positive | 4624640 - 4626100 | 54697.3 |
| duf440 family protein | E0F20_22845 | Not Available | Positive | 4626135 - 4626464 | 12715.7 |
| transporter | E0F20_22850 | Not Available | Negative | 4626502 - 4627338 | 31969.0 |
| abc transporter atp-binding protein | E0F20_22855 | Not Available | Negative | 4627384 - 4628388 | 37161.6 |
| abc transporter atp-binding protein | E0F20_22860 | Not Available | Negative | 4628385 - 4629398 | 36955.4 |
| oligopeptide abc transporter permease oppc | E0F20_22865 | Not Available | Negative | 4629410 - 4630318 | 33125.1 |
| oligopeptide abc transporter permease oppb | E0F20_22870 | Not Available | Negative | 4630333 - 4631253 | 33362.0 |
| oligopeptide abc transporter substrate-binding protein oppa | E0F20_22875 | Not Available | Negative | 4631376 - 4633007 | 61439.6 |
| l-serine ammonia-lyase | E0F20_22885 | Not Available | Negative | 4633522 - 4634886 | 48357.2 |
| enamine/imine deaminase | E0F20_22890 | Not Available | Negative | 4634974 - 4635369 | 14153.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

