Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine aminotransferase | E0F20_22790 | Not Available | Negative | 4610726 - 4612168 | 52420.6 |
| pas domain-containing methyl-accepting chemotaxis protein | E0F20_22795 | Not Available | Positive | 4612536 - 4614056 | 55497.4 |
| padr family transcriptional regulator | E0F20_22800 | Not Available | Negative | 4614110 - 4614784 | 25449.9 |
| molecular chaperone dnak | E0F20_22805 | Not Available | Positive | 4615018 - 4616940 | 69305.0 |
| molecular chaperone dnaj | E0F20_22810 | Not Available | Positive | 4617026 - 4618159 | 41014.7 |
| na+/h+ antiporter nhaa | E0F20_22815 | Not Available | Positive | 4618366 - 4619532 | 41316.4 |
| transcriptional activator nhar | E0F20_22820 | Not Available | Positive | 4619571 - 4620470 | 34042.9 |
| glycoside hydrolase family 31 protein | E0F20_22825 | Not Available | Negative | 4620520 - 4622559 | 78652.1 |
| mfs transporter | E0F20_22830 | Not Available | Negative | 4622600 - 4623973 | 50109.2 |
| yciy family protein | E0F20_22835 | Not Available | Negative | 4624324 - 4624497 | 7041.78 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

