Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | E0F20_22690 | Not Available | Positive | 4590708 - 4592492 | 66543.4 |
| tryptophan--trna ligase | E0F20_22695 | Not Available | Positive | 4592694 - 4593698 | 36571.4 |
| sdr family oxidoreductase | E0F20_22700 | Not Available | Negative | 4594119 - 4594865 | 26646.3 |
| yafy family transcriptional regulator | E0F20_22705 | Not Available | Negative | 4594936 - 4595625 | 26735.4 |
| l-ascorbate 6-phosphate lactonase | E0F20_22710 | Not Available | Positive | 4595992 - 4597056 | 40065.7 |
| hth-type transcriptional regulator ular | E0F20_22715 | Not Available | Positive | 4597163 - 4597918 | 27580.5 |
| esterase | E0F20_22720 | Not Available | Negative | 4597915 - 4598664 | 27709.5 |
| biofilm peroxide resistance protein bsma | E0F20_22725 | Not Available | Positive | 4598846 - 4599175 | 12111.8 |
| duf1471 domain-containing protein | E0F20_22730 | Not Available | Positive | 4599323 - 4599598 | 9787.56 |
| isovaleryl-coa dehydrogenase | E0F20_22735 | Not Available | Negative | 4599684 - 4601306 | 60490.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

