Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid sos inhibition protein a | E0F20_22590 | Not Available | Positive | 4573368 - 4574090 | 27963.7 |
| theronine dehydrogenase | E0F20_22595 | Not Available | Positive | 4574093 - 4574419 | 12751.2 |
| type ii toxin-antitoxin system mrna interferase rele | E0F20_22600 | Not Available | Negative | 4574697 - 4574984 | 11225.8 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | E0F20_22605 | Not Available | Negative | 4574984 - 4575223 | 9072.01 |
| hypothetical protein | E0F20_22610 | Not Available | Positive | 4575248 - 4575442 | 7519.27 |
| cation transporter | E0F20_22615 | Not Available | Negative | 4575486 - 4576409 | 33540.8 |
| helix-turn-helix domain-containing protein | E0F20_22620 | Not Available | Positive | 4576493 - 4576744 | 9727.73 |
| eal domain-containing protein | E0F20_22625 | Not Available | Positive | 4576944 - 4577792 | 31677.6 |
| response regulator transcription factor | E0F20_22630 | Not Available | Positive | 4578156 - 4578758 | 22424.2 |
| lysozyme | E0F20_22635 | Not Available | Negative | 4578777 - 4579127 | 13133.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

