Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_22385 | Not Available | Positive | 4533522 - 4533794 | 9708.85 |
| signal peptidase i | E0F20_22390 | Not Available | Positive | 4533805 - 4534329 | 19760.9 |
| conjugal transfer protein | E0F20_22395 | Not Available | Positive | 4534533 - 4535636 | 41549.3 |
| hypothetical protein | E0F20_22405 | Not Available | Positive | 4536726 - 4537034 | 11141.4 |
| hypothetical protein | E0F20_22410 | Not Available | Negative | 4537402 - 4537593 | 7460.09 |
| isl3 family transposase | E0F20_22415 | Not Available | Negative | 4537626 - 4538894 | 48255.4 |
| type i restriction endonuclease subunit r | E0F20_22420 | Not Available | Negative | 4538899 - 4542156 | 121770.0 |
| restriction endonuclease subunit s | E0F20_22425 | Not Available | Negative | 4542157 - 4543491 | 49574.5 |
| sam-dependent dna methyltransferase | E0F20_22430 | Not Available | Negative | 4543488 - 4545515 | 76284.2 |
| topoisomerase | E0F20_22435 | Not Available | Positive | 4545674 - 4546753 | 40481.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

