Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1043 family protein | E0F20_22330 | Not Available | Positive | 4521219 - 4521617 | 14964.7 |
| serine endoprotease degq | E0F20_22335 | Not Available | Positive | 4521786 - 4523153 | 47424.2 |
| serine endoprotease degs | E0F20_22340 | Not Available | Positive | 4523243 - 4524310 | 37593.5 |
| malate dehydrogenase | E0F20_22345 | Not Available | Negative | 4524367 - 4525302 | 32170.1 |
| transcriptional regulator argr | E0F20_22355 | Not Available | Positive | 4525739 - 4526209 | 17051.7 |
| conjugal transfer protein trbi | E0F20_22360 | Not Available | Positive | 4526414 - 4527811 | 50002.6 |
| type iv conjugative transfer system protein trav | E0F20_22365 | Not Available | Positive | 4527808 - 4528374 | 20080.7 |
| hypothetical protein | E0F20_22370 | Not Available | Positive | 4528468 - 4530066 | 54699.2 |
| dsbc family protein | E0F20_22375 | Not Available | Positive | 4530247 - 4531011 | 27554.3 |
| type iv secretion system protein trac | E0F20_22380 | Not Available | Positive | 4531039 - 4533525 | 93469.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

