Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family efflux mfs transporter | E0F20_21345 | Not Available | Negative | 4329261 - 4330463 | 43140.2 |
| hypothetical protein | E0F20_21350 | Not Available | Negative | 4330612 - 4331004 | 14981.6 |
| inovirus gp2 family protein | E0F20_21355 | Not Available | Negative | 4331183 - 4331752 | 22988.2 |
| mfs transporter | E0F20_21360 | Not Available | Positive | 4331879 - 4332430 | 20379.8 |
| hlyc/corc family transporter | E0F20_21370 | Not Available | Positive | 4333792 - 4335132 | 49738.6 |
| duf1107 domain-containing protein | E0F20_21375 | Not Available | Negative | 4335199 - 4335405 | 8088.21 |
| ytfj family protein | E0F20_21385 | Not Available | Positive | 4335734 - 4336291 | 20580.8 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | E0F20_21390 | Not Available | Negative | 4336281 - 4337021 | 27249.6 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | E0F20_21395 | Not Available | Positive | 4337210 - 4339153 | 70741.9 |
| transcriptional regulator | E0F20_21400 | Not Available | Negative | 4339251 - 4339631 | 14114.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

