Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division activator ceda | E0F20_21090 | Not Available | Negative | 4275588 - 4275842 | 9823.95 |
| chitin disaccharide deacetylase | E0F20_21100 | Not Available | Negative | 4276835 - 4277593 | 27961.4 |
| 6-phospho-beta-glucosidase | E0F20_21105 | Not Available | Negative | 4277606 - 4278961 | 50445.1 |
| transcriptional regulator chbr | E0F20_21110 | Not Available | Negative | 4279086 - 4279928 | 33197.6 |
| pts n,n'-diacetylchitobiose transporter subunit iia | E0F20_21115 | Not Available | Negative | 4279939 - 4280286 | 12749.5 |
| pts n,n'-diacetylchitobiose transporter subunit iic | E0F20_21120 | Not Available | Negative | 4280341 - 4281699 | 48430.0 |
| murr/rpir family transcriptional regulator | E0F20_21125 | Not Available | Positive | 4281944 - 4282798 | 31513.6 |
| slp family lipoprotein | E0F20_21130 | Not Available | Positive | 4283043 - 4283609 | 20967.2 |
| efflux rnd transporter periplasmic adaptor subunit | E0F20_21135 | Not Available | Positive | 4283890 - 4285044 | 41514.9 |
| multidrug efflux rnd transporter permease subunit | E0F20_21140 | Not Available | Positive | 4285073 - 4288189 | 112429.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

