Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic-guanylate-specific phosphodiesterase | E0F20_20885 | Not Available | Negative | 4233345 - 4234112 | 29400.6 |
| sugar kinase | E0F20_20890 | Not Available | Positive | 4234343 - 4235272 | 33873.1 |
| insulinase family protein | E0F20_20895 | Not Available | Negative | 4235372 - 4236865 | 55477.2 |
| dicarboxylate/amino acid:cation symporter | E0F20_20900 | Not Available | Negative | 4237087 - 4238373 | 45476.2 |
| biofilm formation regulator hmsp | E0F20_20905 | Not Available | Negative | 4238531 - 4240537 | 75425.6 |
| type i toxin-antitoxin system toxin ldr family protein | E0F20_20910 | Not Available | Negative | 4240764 - 4240871 | 3873.89 |
| methionine gamma-lyase | E0F20_20920 | Not Available | Positive | 4241299 - 4242495 | 42896.5 |
| transporter | E0F20_20925 | Not Available | Positive | 4242613 - 4242844 | 8475.55 |
| hth-type transcriptional regulator cysb | E0F20_20930 | Not Available | Positive | 4242955 - 4243929 | 36103.2 |
| ymia family putative membrane protein | E0F20_20935 | Not Available | Positive | 4244256 - 4244384 | 4787.95 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

