Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | E0F20_20685 | Not Available | Positive | 4193175 - 4194170 | 36526.3 |
| wyl domain-containing protein | E0F20_20690 | Not Available | Positive | 4194648 - 4195568 | 35717.9 |
| chemotaxis protein | E0F20_20695 | Not Available | Positive | 4195607 - 4196704 | 38942.4 |
| atp--cob(i)alamin adenosyltransferase | E0F20_20700 | Not Available | Positive | 4196751 - 4198322 | 58911.1 |
| ykgj family cysteine cluster protein | E0F20_20705 | Not Available | Positive | 4198319 - 4198585 | 10371.4 |
| redox-regulated atpase ychf | E0F20_20710 | Not Available | Negative | 4198758 - 4199852 | 39703.6 |
| aminoacyl-trna hydrolase | E0F20_20715 | Not Available | Negative | 4199968 - 4200552 | 21080.5 |
| stress response protein ychh | E0F20_20720 | Not Available | Positive | 4200827 - 4201108 | 10529.9 |
| lysine-sensitive aspartokinase 3 | E0F20_20725 | Not Available | Negative | 4201223 - 4202584 | 49190.7 |
| trna/rrna methyltransferase | E0F20_20730 | Not Available | Positive | 4203036 - 4203722 | 25559.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

