Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | E0F20_20585 | Not Available | Negative | 4171023 - 4171664 | 24730.7 |
| putative lateral flagellar export/assembly protein lafu | E0F20_20590 | Not Available | Negative | 4171721 - 4172560 | 30921.3 |
| flagellar type iii secretion system protein flha | E0F20_20595 | Not Available | Positive | 4172544 - 4174265 | 62642.5 |
| peptidoglycan endopeptidase | E0F20_20600 | Not Available | Negative | 4174303 - 4175064 | 28951.5 |
| secy-interacting protein | E0F20_20605 | Not Available | Negative | 4175221 - 4175766 | 20420.2 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | E0F20_20610 | Not Available | Positive | 4175835 - 4176683 | 32497.0 |
| nucleotide 5'-monophosphate nucleosidase | E0F20_20615 | Not Available | Positive | 4176796 - 4178160 | 50860.9 |
| haaap family serine/threonine permease | E0F20_20620 | Not Available | Positive | 4178721 - 4180010 | 46892.2 |
| l-serine ammonia-lyase | E0F20_20625 | Not Available | Positive | 4180064 - 4181431 | 48807.9 |
| flap endonuclease xni | E0F20_20630 | Not Available | Positive | 4181598 - 4182353 | 28282.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

