Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | E0F20_20380 | Not Available | Positive | 4119471 - 4121957 | 92056.9 |
| type 1 fimbrial protein | E0F20_20385 | Not Available | Positive | 4121969 - 4122991 | 37257.6 |
| heavy metal resistance protein | E0F20_20390 | Not Available | Negative | 4123047 - 4123379 | 12182.7 |
| hydroxyethylthiazole kinase | E0F20_20395 | Not Available | Positive | 4123742 - 4124524 | 27195.5 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | E0F20_20400 | Not Available | Positive | 4124527 - 4125327 | 28603.2 |
| gntr family transcriptional regulator | E0F20_20405 | Not Available | Positive | 4125370 - 4126116 | 28220.8 |
| sugar kinase | E0F20_20410 | Not Available | Negative | 4126090 - 4127055 | 34439.2 |
| adp-ribosylglycohydrolase family protein | E0F20_20415 | Not Available | Negative | 4127052 - 4128056 | 35381.4 |
| mfs transporter | E0F20_20420 | Not Available | Negative | 4128053 - 4129330 | 47485.1 |
| hypothetical protein | E0F20_20425 | Not Available | Negative | 4129314 - 4129547 | 8537.22 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

