Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | E0F20_20330 | Not Available | Negative | 4107722 - 4108804 | 40548.6 |
| glutamyl-trna reductase | E0F20_20335 | Not Available | Negative | 4108846 - 4110102 | 46180.2 |
| lipoprotein localization protein lolb | E0F20_20340 | Not Available | Positive | 4110314 - 4110937 | 23525.0 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | E0F20_20345 | Not Available | Positive | 4110934 - 4111785 | 30842.2 |
| ribose-phosphate pyrophosphokinase | E0F20_20350 | Not Available | Positive | 4112052 - 4112999 | 34218.3 |
| c4-dicarboxylic acid transporter daua | E0F20_20355 | Not Available | Positive | 4113124 - 4114806 | 59489.7 |
| aspartate aminotransferase family protein | E0F20_20360 | Not Available | Negative | 4114927 - 4116390 | 53139.6 |
| diaminobutyrate--2-oxoglutarate transaminase | E0F20_20365 | Not Available | Negative | 4116406 - 4117791 | 49635.2 |
| fimbrial protein yehd | E0F20_20370 | Not Available | Positive | 4118182 - 4118712 | 18377.5 |
| fimbrial assembly chaperone | E0F20_20375 | Not Available | Positive | 4118776 - 4119456 | 25081.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

