Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane metalloprotease | E0F20_20075 | Not Available | Positive | 4057601 - 4058290 | 26051.9 |
| mfs transporter | E0F20_20080 | Not Available | Negative | 4058321 - 4059574 | 45042.9 |
| fadr family transcriptional regulator | E0F20_20085 | Not Available | Positive | 4059918 - 4060622 | 26583.2 |
| dha2 family efflux mfs transporter permease subunit | E0F20_20090 | Not Available | Positive | 4060624 - 4062051 | 51395.0 |
| transcriptional regulator rbsr | E0F20_20095 | Not Available | Negative | 4062017 - 4063009 | 36613.2 |
| ribokinase | E0F20_20100 | Not Available | Negative | 4063013 - 4063942 | 32047.1 |
| ribose abc transporter substrate-binding protein rbsb | E0F20_20105 | Not Available | Negative | 4064084 - 4064974 | 30939.3 |
| ribose abc transporter permease | E0F20_20110 | Not Available | Negative | 4064999 - 4065964 | 33341.9 |
| ribose abc transporter atp-binding protein rbsa | E0F20_20115 | Not Available | Negative | 4065970 - 4067475 | 55113.2 |
| d-ribose pyranase | E0F20_20120 | Not Available | Negative | 4067483 - 4067902 | 15344.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

