Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type protein napc | E0F20_19975 | Not Available | Negative | 4038693 - 4039295 | 23287.1 |
| nitrate reductase cytochrome c-type subunit | E0F20_19980 | Not Available | Negative | 4039305 - 4039754 | 16314.5 |
| quinol dehydrogenase ferredoxin subunit naph | E0F20_19985 | Not Available | Negative | 4039751 - 4040614 | 31630.1 |
| ferredoxin-type protein napg | E0F20_19990 | Not Available | Negative | 4040601 - 4041296 | 25027.3 |
| nitrate reductase catalytic subunit napa | E0F20_19995 | Not Available | Negative | 4041303 - 4043789 | 93095.2 |
| chaperone napd | E0F20_20000 | Not Available | Negative | 4043786 - 4044049 | 9542.21 |
| ferredoxin-type protein napf | E0F20_20005 | Not Available | Negative | 4044039 - 4044530 | 18006.2 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | E0F20_20010 | Not Available | Positive | 4045126 - 4046655 | 54467.3 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | E0F20_20015 | Not Available | Positive | 4046666 - 4048054 | 48888.1 |
| ai-2e family transporter | E0F20_20020 | Not Available | Negative | 4048101 - 4049135 | 37415.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

