Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | E0F20_19925 | Not Available | Negative | 4031430 - 4031570 | 5173.29 |
| nitrate/nitrite response regulator protein narp | E0F20_19930 | Not Available | Positive | 4031596 - 4032243 | 23520.4 |
| cytochrome c-type biogenesis protein ccmh | E0F20_19935 | Not Available | Negative | 4032345 - 4033394 | 39122.3 |
| thiol:disulfide interchange protein dsbe | E0F20_19940 | Not Available | Negative | 4033391 - 4033948 | 20733.9 |
| heme lyase ccmf/nrfe family subunit | E0F20_19945 | Not Available | Negative | 4033945 - 4035900 | 71938.2 |
| cytochrome c maturation protein ccme | E0F20_19950 | Not Available | Negative | 4035897 - 4036376 | 17874.5 |
| heme exporter protein ccmd | E0F20_19955 | Not Available | Negative | 4036373 - 4036585 | 7773.6 |
| heme abc transporter permease | E0F20_19960 | Not Available | Negative | 4036582 - 4037319 | 27860.0 |
| heme exporter protein ccmb | E0F20_19965 | Not Available | Negative | 4037396 - 4038055 | 23457.2 |
| cytochrome c biogenesis heme-transporting atpase ccma | E0F20_19970 | Not Available | Negative | 4038052 - 4038672 | 23228.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

