Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | E0F20_19860 | Not Available | Positive | 4019692 - 4020765 | 37864.5 |
| sensor histidine kinase | E0F20_19865 | Not Available | Negative | 4020758 - 4022209 | 54400.3 |
| transcriptional regulator tctd | E0F20_19870 | Not Available | Negative | 4022196 - 4022870 | 25196.6 |
| tripartite tricarboxylate transporter substrate binding protein | E0F20_19875 | Not Available | Positive | 4023024 - 4024001 | 35500.9 |
| tripartite tricarboxylate transporter tctb family protein | E0F20_19880 | Not Available | Positive | 4024016 - 4024450 | 15914.3 |
| tripartite tricarboxylate transporter permease | E0F20_19885 | Not Available | Positive | 4024461 - 4025975 | 52617.1 |
| lysr family transcriptional regulator | E0F20_19890 | Not Available | Negative | 4026046 - 4026936 | 33034.3 |
| short chain dehydrogenase | E0F20_19895 | Not Available | Positive | 4027035 - 4027640 | 21405.5 |
| extracellular solute-binding protein | E0F20_19900 | Not Available | Negative | 4027693 - 4029912 | 82413.4 |
| dini family protein | E0F20_19915 | Not Available | Positive | 4030700 - 4030942 | 9256.19 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

