Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhch/yjgk/yial family protein | E0F20_19810 | Not Available | Positive | 4004296 - 4004763 | 17105.8 |
| cytosine deaminase | E0F20_19815 | Not Available | Negative | 4004822 - 4006102 | 47750.0 |
| cytosine permease | E0F20_19820 | Not Available | Negative | 4006092 - 4007342 | 43366.6 |
| duf1016 domain-containing protein | E0F20_19825 | Not Available | Negative | 4007480 - 4008562 | 41528.9 |
| glutamate synthase small subunit | E0F20_19830 | Not Available | Negative | 4008762 - 4010180 | 52202.4 |
| glutamate synthase large subunit | E0F20_19835 | Not Available | Negative | 4010193 - 4014653 | 163221.0 |
| hypothetical protein | E0F20_19840 | Not Available | Negative | 4015552 - 4015731 | 6788.41 |
| type 1 fimbrial protein | E0F20_19845 | Not Available | Positive | 4015805 - 4016383 | 19480.8 |
| molecular chaperone | E0F20_19850 | Not Available | Positive | 4016438 - 4017109 | 25160.1 |
| fimbrial biogenesis outer membrane usher protein | E0F20_19855 | Not Available | Positive | 4017123 - 4019681 | 94284.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

