Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | E0F20_19660 | Not Available | Negative | 3971489 - 3971869 | 13873.5 |
| pantoate--beta-alanine ligase | E0F20_19665 | Not Available | Negative | 3971965 - 3972819 | 31765.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | E0F20_19670 | Not Available | Negative | 3972941 - 3973732 | 28240.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | E0F20_19675 | Not Available | Negative | 3973853 - 3974332 | 17825.5 |
| polynucleotide adenylyltransferase | E0F20_19680 | Not Available | Negative | 3974329 - 3975747 | 54754.0 |
| trna glutamyl-q(34) synthetase gluqrs | E0F20_19685 | Not Available | Negative | 3975798 - 3976694 | 33891.4 |
| rna polymerase-binding protein dksa | E0F20_19690 | Not Available | Negative | 3976765 - 3977220 | 17530.7 |
| dna/rna nuclease sfsa | E0F20_19695 | Not Available | Negative | 3977398 - 3978102 | 25978.1 |
| rna 2',3'-cyclic phosphodiesterase | E0F20_19700 | Not Available | Negative | 3978118 - 3978648 | 19795.9 |
| atp-dependent helicase hrpb | E0F20_19705 | Not Available | Positive | 3978677 - 3981151 | 90842.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

