Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat domain-containing protein | E0F20_19560 | Not Available | Negative | 3951297 - 3951884 | 21169.5 |
| type 1 fimbrial protein | E0F20_19565 | Not Available | Positive | 3952250 - 3952798 | 18878.1 |
| type 1 fimbrial protein | E0F20_19570 | Not Available | Positive | 3952868 - 3953416 | 20159.8 |
| papc/fimd family outer membrane usher protein | E0F20_19575 | Not Available | Positive | 3953458 - 3955929 | 91312.5 |
| molecular chaperone | E0F20_19580 | Not Available | Positive | 3955956 - 3956732 | 28501.5 |
| type 1 fimbrial protein | E0F20_19585 | Not Available | Positive | 3956745 - 3957350 | 22056.7 |
| fimbrial protein | E0F20_19590 | Not Available | Positive | 3957347 - 3958411 | 38196.9 |
| type 1 fimbrial protein | E0F20_19595 | Not Available | Positive | 3958421 - 3958963 | 19345.8 |
| o-antigen ligase domain-containing protein | E0F20_19600 | Not Available | Positive | 3958965 - 3960632 | 62252.2 |
| eal domain-containing protein | E0F20_19605 | Not Available | Positive | 3960634 - 3961353 | 27636.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

