Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_19460 | Not Available | Positive | 3929713 - 3930156 | 16437.2 |
| hnh endonuclease | E0F20_19465 | Not Available | Positive | 3931175 - 3932017 | 32115.6 |
| hypothetical protein | E0F20_19470 | Not Available | Positive | 3932439 - 3932690 | 9200.32 |
| hypothetical protein | E0F20_19475 | Not Available | Positive | 3933146 - 3933667 | 19661.6 |
| hypothetical protein | E0F20_19480 | Not Available | Positive | 3933714 - 3933983 | 9624.29 |
| para family protein | E0F20_19485 | Not Available | Positive | 3934647 - 3935702 | 40081.9 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | E0F20_19490 | Not Available | Negative | 3935788 - 3936549 | 27099.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | E0F20_19495 | Not Available | Negative | 3936607 - 3937443 | 31130.3 |
| acetyl-coa c-acetyltransferase | E0F20_19500 | Not Available | Negative | 3937915 - 3939093 | 41327.6 |
| lysr family transcriptional regulator | E0F20_19505 | Not Available | Negative | 3939196 - 3940080 | 32789.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

