Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | E0F20_19195 | Not Available | Negative | 3889584 - 3890360 | 28484.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | E0F20_19200 | Not Available | Negative | 3890342 - 3891079 | 25971.0 |
| imidazole glycerol phosphate synthase subunit hish | E0F20_19205 | Not Available | Negative | 3891079 - 3891669 | 21631.1 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | E0F20_19210 | Not Available | Negative | 3891669 - 3892736 | 40277.4 |
| histidinol-phosphate transaminase | E0F20_19215 | Not Available | Negative | 3892733 - 3893812 | 39888.7 |
| histidinol dehydrogenase | E0F20_19220 | Not Available | Negative | 3893809 - 3895113 | 46227.0 |
| atp phosphoribosyltransferase | E0F20_19225 | Not Available | Negative | 3895119 - 3896018 | 33206.6 |
| his operon leader peptide | E0F20_19230 | Not Available | Negative | 3896162 - 3896209 | 1916.22 |
| sdr family oxidoreductase | E0F20_19235 | Not Available | Positive | 3896384 - 3897208 | 29693.9 |
| lysr family transcriptional regulator | E0F20_19240 | Not Available | Positive | 3897250 - 3898179 | 34243.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

