Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridine nucleotide-disulfide oxidoreductase | E0F20_18965 | Not Available | Negative | 3848139 - 3849464 | 47849.3 |
| arac family transcriptional regulator | E0F20_18970 | Not Available | Positive | 3849701 - 3850555 | 31447.2 |
| cusa/czca family heavy metal efflux rnd transporter | E0F20_18975 | Not Available | Negative | 3850607 - 3853750 | 114616.0 |
| efflux rnd transporter periplasmic adaptor subunit | E0F20_18980 | Not Available | Negative | 3853762 - 3855054 | 47102.5 |
| copper-binding protein | E0F20_18985 | Not Available | Negative | 3855131 - 3855478 | 12775.5 |
| efflux transporter outer membrane subunit | E0F20_18990 | Not Available | Negative | 3855511 - 3856893 | 50691.9 |
| copper response regulator transcription factor cusr | E0F20_18995 | Not Available | Positive | 3857088 - 3857771 | 25398.1 |
| cu(+)/ag(+) sensor histidine kinase | E0F20_19000 | Not Available | Positive | 3857761 - 3859212 | 54706.3 |
| copper-binding protein | E0F20_19005 | Not Available | Positive | 3859338 - 3859664 | 11692.5 |
| hypothetical protein | E0F20_19010 | Not Available | Positive | 3860037 - 3860543 | 18792.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

