Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | E0F20_18865 | Not Available | Negative | 3831727 - 3833748 | 76681.7 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | E0F20_18870 | Not Available | Negative | 3833758 - 3836220 | 92087.4 |
| n-acetyltransferase family protein | E0F20_18875 | Not Available | Positive | 3837037 - 3837573 | 20040.1 |
| toxin | E0F20_18880 | Not Available | Negative | 3837815 - 3838138 | 12467.3 |
| type iv toxin-antitoxin system yeeu family antitoxin | E0F20_18885 | Not Available | Negative | 3838159 - 3838515 | 13120.7 |
| duf987 domain-containing protein | E0F20_18890 | Not Available | Negative | 3838541 - 3838762 | 8541.4 |
| dna repair protein radc | E0F20_18895 | Not Available | Negative | 3838759 - 3839301 | 20064.2 |
| antirestriction protein | E0F20_18900 | Not Available | Negative | 3839314 - 3839757 | 16613.6 |
| duf945 domain-containing protein | E0F20_18905 | Not Available | Negative | 3839788 - 3840609 | 31050.2 |
| duf905 domain-containing protein | E0F20_18910 | Not Available | Negative | 3840708 - 3840938 | 8992.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

