Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | E0F20_18665 | Not Available | Positive | 3793347 - 3794687 | 48710.1 |
| glucarate dehydratase | E0F20_18670 | Not Available | Positive | 3794708 - 3796048 | 49114.9 |
| glycerate kinase | E0F20_18675 | Not Available | Positive | 3796130 - 3797272 | 39383.0 |
| two-component sensor histidine kinase bara | E0F20_18680 | Not Available | Negative | 3797316 - 3800072 | 102381.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | E0F20_18685 | Not Available | Positive | 3800130 - 3801428 | 48183.1 |
| gtp diphosphokinase | E0F20_18690 | Not Available | Positive | 3801529 - 3803763 | 84102.8 |
| nucleoside triphosphate pyrophosphohydrolase | E0F20_18695 | Not Available | Positive | 3803887 - 3804678 | 30390.0 |
| ctp synthase (glutamine hydrolyzing) | E0F20_18700 | Not Available | Positive | 3804903 - 3806540 | 60170.5 |
| phosphopyruvate hydratase | E0F20_18705 | Not Available | Positive | 3806628 - 3807926 | 45602.5 |
| murr/rpir family transcriptional regulator | E0F20_18710 | Not Available | Negative | 3807982 - 3808806 | 29510.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

