Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease htpx | E0F20_18615 | Not Available | Positive | 3784990 - 3785871 | 31886.3 |
| mfs transporter | E0F20_18620 | Not Available | Negative | 3785918 - 3787291 | 48057.5 |
| dna-binding transcriptional regulator kdgr | E0F20_18625 | Not Available | Positive | 3787466 - 3788257 | 30105.2 |
| hypothetical protein | E0F20_18630 | Not Available | Negative | 3788372 - 3788611 | 8351.43 |
| phop/phoq regulator mgrb | E0F20_18635 | Not Available | Positive | 3788776 - 3788919 | 5560.21 |
| hypothetical protein | E0F20_18640 | Not Available | Positive | 3788994 - 3789278 | 10417.5 |
| yqcc family protein | E0F20_18645 | Not Available | Positive | 3790069 - 3790398 | 12688.1 |
| trna pseudouridine(65) synthase truc | E0F20_18650 | Not Available | Positive | 3790398 - 3791168 | 29345.2 |
| flavodoxin | E0F20_18655 | Not Available | Positive | 3791200 - 3791649 | 16320.1 |
| mfs transporter | E0F20_18660 | Not Available | Positive | 3791992 - 3793344 | 48928.6 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

