Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E0F20_18565 | Not Available | Negative | 3774222 - 3774320 | 3800.5 |
| protein-serine/threonine phosphatase | E0F20_18570 | Not Available | Positive | 3774661 - 3775302 | 24891.9 |
| duf1482 family protein | E0F20_18575 | Not Available | Negative | 3775303 - 3775494 | 7290.54 |
| duf1480 family protein | E0F20_18580 | Not Available | Negative | 3775597 - 3775836 | 8891.49 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | E0F20_18585 | Not Available | Negative | 3775934 - 3777355 | 52669.7 |
| pqib family protein | E0F20_18590 | Not Available | Negative | 3777435 - 3780068 | 94812.6 |
| paraquat-inducible protein a | E0F20_18595 | Not Available | Negative | 3780037 - 3781320 | 48107.2 |
| gaf domain-containing protein | E0F20_18600 | Not Available | Positive | 3781449 - 3781946 | 17983.4 |
| rna chaperone proq | E0F20_18605 | Not Available | Positive | 3782043 - 3782729 | 25398.4 |
| carboxy terminal-processing peptidase | E0F20_18610 | Not Available | Positive | 3782749 - 3784797 | 76540.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

