Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 84): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 3766643 - 3767006 | Not Available |
| integrase | E0F20_18515 | Not Available | Positive | 3767211 - 3768452 | 46766.5 |
| is3 family transposase | E0F20_18520 | Not Available | Negative | 3768560 - 3769668 | 43475.6 |
| dini family protein | E0F20_18525 | Not Available | Negative | 3770044 - 3770286 | 9279.23 |
| lexa family transcriptional regulator | E0F20_18535 | Not Available | Positive | 3770607 - 3770996 | 14286.0 |
| hypothetical protein | E0F20_18540 | Not Available | Negative | 3771292 - 3771705 | 16016.0 |
| hypothetical protein | E0F20_18545 | Not Available | Negative | 3771806 - 3771985 | 6675.07 |
| giy-yig nuclease family protein | E0F20_18550 | Not Available | Positive | 3772221 - 3772688 | 17929.2 |
| hypothetical protein | E0F20_18555 | Not Available | Positive | 3772764 - 3773087 | 12264.9 |
| sos response-associated peptidase | E0F20_18560 | Not Available | Negative | 3773438 - 3774109 | 25076.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

