Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetrathionate reductase subunit ttra | E0F20_18460 | Not Available | Negative | 3742491 - 3745556 | 110816.0 |
| tetrathionate reductase subunit ttrc | E0F20_18465 | Not Available | Negative | 3745549 - 3746571 | 37993.2 |
| tetrathionate reductase subunit ttrb | E0F20_18470 | Not Available | Negative | 3746572 - 3747324 | 27649.1 |
| sensor histidine kinase | E0F20_18475 | Not Available | Positive | 3747534 - 3749267 | 64085.2 |
| two-component system response regulator ttrr | E0F20_18480 | Not Available | Positive | 3749242 - 3749826 | 21477.4 |
| fumarate hydratase fumd | E0F20_18485 | Not Available | Positive | 3749919 - 3750128 | 7778.61 |
| bapa prefix-like domain-containing protein | E0F20_18490 | Not Available | Positive | 3750475 - 3761706 | 375553.0 |
| type i secretion protein tolc | E0F20_18495 | Not Available | Positive | 3761807 - 3763216 | 51538.9 |
| type i secretion system permease/atpase | E0F20_18500 | Not Available | Positive | 3763213 - 3765399 | 80568.4 |
| hlyd family efflux transporter periplasmic adaptor subunit | E0F20_18505 | Not Available | Positive | 3765407 - 3766570 | 43121.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

