Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator tyrr | E0F20_18310 | Not Available | Positive | 3715485 - 3717029 | 57859.8 |
| thiol peroxidase | E0F20_18315 | Not Available | Negative | 3717083 - 3717589 | 17796.3 |
| l-ala-d/l-glu epimerase | E0F20_18320 | Not Available | Positive | 3717705 - 3718670 | 34328.3 |
| murein tripeptide amidase mpaa | E0F20_18325 | Not Available | Negative | 3718645 - 3719373 | 26374.1 |
| peptide abc transporter substrate-binding protein | E0F20_18330 | Not Available | Positive | 3719558 - 3721171 | 59914.3 |
| marr family transcriptional regulator | E0F20_18335 | Not Available | Negative | 3721209 - 3721772 | 21158.6 |
| thioredoxin family protein | E0F20_18340 | Not Available | Positive | 3721887 - 3722117 | 8098.76 |
| transcriptional antiterminator | E0F20_18345 | Not Available | Positive | 3722184 - 3722468 | 10718.8 |
| deor/glpr transcriptional regulator | E0F20_18350 | Not Available | Negative | 3722465 - 3723235 | 27502.2 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | E0F20_18355 | Not Available | Positive | 3723356 - 3723739 | 14034.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

