Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribose diphosphatase | E0F20_18095 | Not Available | Positive | 3675575 - 3676207 | 23908.4 |
| duf1249 family protein | E0F20_18100 | Not Available | Positive | 3676204 - 3676626 | 16485.7 |
| 3',5'-cyclic-amp phosphodiesterase | E0F20_18105 | Not Available | Positive | 3676651 - 3677478 | 30969.6 |
| esterase yqia | E0F20_18110 | Not Available | Positive | 3677478 - 3678059 | 21707.9 |
| dna topoisomerase iv subunit b | E0F20_18115 | Not Available | Positive | 3678088 - 3679980 | 70148.6 |
| antibiotic biosynthesis monooxygenase | E0F20_18120 | Not Available | Negative | 3680088 - 3680402 | 11513.9 |
| flavodoxin family protein | E0F20_18125 | Not Available | Negative | 3680433 - 3681014 | 21742.9 |
| two-component system sensor histidine kinase qsec | E0F20_18130 | Not Available | Negative | 3681124 - 3682473 | 50305.5 |
| two-component system response regulator qseb | E0F20_18135 | Not Available | Negative | 3682470 - 3683129 | 24209.3 |
| ygiw/ydei family stress tolerance ob fold protein | E0F20_18140 | Not Available | Positive | 3683280 - 3683678 | 14155.7 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

