Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative selenium delivery protein ydfz | E0F20_18045 | Not Available | Negative | 3664876 - 3665079 | 7373.9 |
| gntr family transcriptional regulator | E0F20_18050 | Not Available | Negative | 3665271 - 3665957 | 26469.7 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | E0F20_18055 | Not Available | Negative | 3666044 - 3666790 | 27262.5 |
| peptidyl-dipeptidase dcp | E0F20_18060 | Not Available | Positive | 3666928 - 3668973 | 77353.3 |
| hypothetical protein | E0F20_18065 | Not Available | Positive | 3669262 - 3669480 | 8283.14 |
| zinc transporter zupt | E0F20_18070 | Not Available | Negative | 3670089 - 3670862 | 26365.3 |
| 4,5-dopa dioxygenase extradiol | E0F20_18075 | Not Available | Positive | 3671010 - 3671798 | 28789.3 |
| glutathionylspermidine synthase family protein | E0F20_18080 | Not Available | Negative | 3671884 - 3673044 | 44992.4 |
| duf1190 family protein | E0F20_18085 | Not Available | Negative | 3673050 - 3673727 | 23547.8 |
| outer membrane channel protein tolc | E0F20_18090 | Not Available | Negative | 3673885 - 3675369 | 53598.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

