Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 2016WA-SCV |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
118039 bp
Thymine Count
117524 bp
Guanine Count
108052 bp
Cytosine Count
108269 bp
Genome Length
451884 bp
Protein-coding Genes
4973 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylsulfoxide reductase | E0F20_17990 | Not Available | Negative | 3653847 - 3654701 | 30372.2 |
| dimethylsulfoxide reductase subunit b | E0F20_17995 | Not Available | Negative | 3654703 - 3655320 | 22634.8 |
| duf1161 domain-containing protein | E0F20_18005 | Not Available | Negative | 3657907 - 3658215 | 10752.7 |
| ynfc family lipoprotein | E0F20_18010 | Not Available | Positive | 3658318 - 3659028 | 26273.1 |
| spermidine n1-acetyltransferase | E0F20_18015 | Not Available | Negative | 3659036 - 3659596 | 21843.2 |
| duf1283 family protein | E0F20_18020 | Not Available | Negative | 3659632 - 3659973 | 12860.2 |
| ynfa family protein | E0F20_18025 | Not Available | Positive | 3660127 - 3660453 | 11835.0 |
| starvation-sensing protein rspa | E0F20_18030 | Not Available | Positive | 3660561 - 3661775 | 45883.9 |
| mfs transporter | E0F20_18035 | Not Available | Positive | 3661836 - 3663170 | 48501.8 |
| fructuronate reductase | E0F20_18040 | Not Available | Positive | 3663334 - 3664800 | 53849.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

